Package index

All functions

plot_likelihood()

Plot likelihood profile

plot_retrospective()

Plot retrospective analysis of spawning biomass and fishing mortality

run_fims_likelihood()

Run likelihood profile for a FIMS model

run_fims_retrospective()

Function runs a retrospective analysis for a FIMS model based on a vector of years to be removed from the data

run_modified_data_fims()

Function to remove a given number of years of data and run FIMS model This function is called by run_fims_retrospective()

run_modified_pars_fims()

Modify a parameter input and run a FIMS model This function is called by run_fims_likelihood()