FIMS/doxygen/log__devs_8hpp_source.html

#ifndef FIMS_POPULATION_DYNAMICS_RECRUITMENT_LOG_DEVS_HPP

#define FIMS_POPULATION_DYNAMICS_RECRUITMENT_LOG_DEVS_HPP


#include "recruitment_base.hpp"

#include "common/fims_vector.hpp"


namespace fims_popdy {


template <typename Type>


struct LogDevs : public RecruitmentBase<Type> {

  LogDevs() : RecruitmentBase<Type>() {}


  virtual ~LogDevs() {}


  virtual const Type evaluate_process(size_t pos) {

    return this->recruitment->log_expected_recruitment[pos] +

           this->recruitment->log_recruit_devs[pos];

  }


  virtual const Type evaluate_mean(const Type& spawners, const Type& phi_0) {

    return 0;

  }


};


}  // namespace fims_popdy


#endif /* FIMS_POPULATION_DYNAMICS_RECRUITMENT_LOG_DEVS_HPP */

fims_vector.hpp
Establishes the FIMS Vector class.

fims_popdy
The population dynamics of FIMS.
Definition catch_at_age.hpp:45

fims_popdy::BuildAgeToLengthConversionFleet
std::shared_ptr< AgeToLengthConversionBase< Type > > BuildAgeToLengthConversionFleet(const std::shared_ptr< Population< Type > > &population, const std::shared_ptr< Fleet< Type > > &fleet)
Build the active age-to-length conversion for a fleet from the current population and fleet state.
Definition runtime.hpp:44

recruitment_base.hpp
Serves as the parent class where recruitment functions are called.

fims_popdy::LogDevs
Log Devs class that returns the log of the input added to the log of the recruitment deviations.
Definition log_devs.hpp:21

fims_popdy::LogDevs::evaluate_process
virtual const Type evaluate_process(size_t pos)
Log of the recruitment deviations approach to adding error to expected recruitment.
Definition log_devs.hpp:34

fims_popdy::LogDevs::evaluate_mean
virtual const Type evaluate_mean(const Type &spawners, const Type &phi_0)
Evaluates expected recruitment from the stock–recruitment relationship before recruitment-process dev...
Definition log_devs.hpp:40

fims_popdy::RecruitmentBase
Base class for all recruitment functors.
Definition recruitment_base.hpp:27

fims_popdy::RecruitmentBase::recruitment
std::shared_ptr< fims_popdy::RecruitmentBase< Type > > recruitment
Definition recruitment_base.hpp:48